Research Programmer IV- Machine Learning & Computational Neuroscience, Kennedy Lab

ABOUT US:

Scripps Research is a nonprofit biomedical institute ranked as one of the most influential in the world for its impact on innovation. We celebrated our 100-year legacy in 2024. This significant milestone marks a century of seminal discoveries in immunology, infectious diseases (such as COVID-19, flu, HIV), neuroscience, heart disease, cancer, and more. Located in La Jolla, California, the institute houses six research departments, multiple Nobel laureates, a top-ranked graduate school and a leading postdoctoral training program. Scripps Research encompasses two elite and highly innovative institutes, the Calibr-Skaggs Institute for Innovative Medicines and Scripps Research Translational Institute, which merge foundational studies in biology, chemistry and computer science with translational science to produce pioneering drugs and advances in digital and precision medicine. Together, we cultivate new scientific leaders and expand the frontiers of knowledge to deliver medical breakthroughs impacting human health around the globe. If you have a passion for making a difference, this could be your opportunity to join our transformative team.

POSITION TITLE: Research Programmer IV (Software Engineer)

POSITION SUMMARY:

The Kennedy laboratory is involved in numerous projects to track, quantify, and forecast individual and group behavior and relate it to recorded neural activity. We develop new computational methods to understand how agents (animals, humans, virtual) gather information about their sensory environment, integrate this with internal motivational needs, and execute goal-directed actions in complex, naturalistic environments. We also develop machine learning and computer vision platforms for high-throughput animal phenotyping, with the goal of accelerating drug screening and repurposing efforts at Scripps.

We seek motivated individuals interested in gaining hands-on experience in scientific research projects, with a goal of contributing to scientific papers and participating in an active lab environment. You will also have the opportunity to lead independent research projects on existing datasets from our collaborators (U Penn, UCLA, Harvard, U Utah, Northwestern, and others). This is an ideal position for applicants interested in building their scientific CV ahead of applying to graduate programs in Computational Neuroscience or Machine Learning, or those looking for a longer term position where they can contribute to original scientific research and model development.

REQUIREMENTS:

• Bachelor's degree in Computer Science, Information Systems or related field or an equivalent combination of education, training and/or experience. A degree in a biological or chemical science may be accepted if applicable to the science developed/performed in the individual lab.

• Minimum of 8 years experience in software application development or research programming.
• Extensive experience with software development in Python.
• Experience building and training deep neural networks for supervised, unsupervised, or reinforcement learning problems.
• A demonstrated ability to apply the fundamentals of software application development.
• Experience with version control, including git and github.

Please include code samples and/or a link to a public code repository with examples of your work.

PREFERRED SKILLSET:

Prior experience with the one or more of the following is preferred:

• Experience with sequence/time series data, control/reinforcement learning problems and environments, time series forecasting.
• An understanding of generative modeling (hidden Markov models, diffusion models, etc).
• Familiarity with topics in motor control, robotics, and neuroscience.

As a member of a computational lab working in team projects, the following general skills are also preferred:

• Experience developing scalable system architectures that adhere to good software engineering principles.
• Ability to tackle large, open-ended research questions independently and as part of a team.
• Willingness to be an active participant in a computational lab environment, including taking part in lab meetings, journal clubs, and hackathons.
• Experience working within a diverse, interdisciplinary team.
• Experience contributing to open source software projects.

LOCATION: La Jolla, California.

PHYSICAL REQUIREMENTS: This position works in an office environment, and it is expected that work will be primarily performed in-person.

COMPENSTAION:

The expected hiring range for this position is $90,000 to $110,000, commensurate with experience. Consideration will be given to experience that exceeds the listed requirements.

COMPREHENSIVE BENEFITS INCLUDE: